Comparison Report

Comparison between codemeta_15204558.json and somef_codemeta_15204558.json:

Summary

Comparison for Zenodo record 15204558, R3BRoot, hosted on RepoType.GITHUB:

  • contains 0 differences
  • contains 0 same values
  • missing 1 keys in docs/records/15204558/codemeta_15204558.json:
  • version
  • missing 10 keys in docs/records/15204558/somef_codemeta_15204558.json:
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    • datePublished
    • programmingLanguage
    • issueTracker
    • readme
    • dateCreated

Full Report

Same Values

No items have the same values.

Differences

No differences found.

Missing Keys in First File:

  • version

Missing Keys in Second File:

  • name
  • codeRepository
  • license
  • version
  • softwareVersion
  • datePublished
  • programmingLanguage
  • issueTracker
  • readme
  • dateCreated

Completeness Report

12193515

Meta

  • generated_at: 2025-05-14T06:57:26.077653
  • workflow: {'name': 'CodeMetaEvaluator', 'url': '', 'version': 'v0.0.1'}

Data

  • indicator: {'id': 'F1', 'name': 'CodemetaCompleteness', 'identifier': ''}
  • artifacts: {'url': '', 'softwareVersion': 'nov23', 'report': 'Completeness of the CodeMeta file based on the CodeMeta codemeta-3.0 specification.\n\nThe following keys are missing: targetProduct, applicationSubCategory, fileSize, installUrl, memoryRequirements, permissions, processorRequirements, softwareHelp, storageRequirements, supportingData, citation, copyrightHolder, copyrightYear, editor, encoding, fileFormat, funder, producer, provider, publisher, sponsor, version, isAccessibleForFree, isPartOf, hasPart, position, identifier, sameAs, url, relatedLink, givenName, familyName, email, affiliation, identifier, address, , , softwareSuggestions, continuousIntegration, buildInstructions, embargoEndDate, funding, creator, review, reviewAspect, reviewBody, endDate, roleName, startDate', 'codemeta': {'@context': 'https://doi.org/10.5063/schema/codemeta-2.0', '@type': 'SoftwareSourceCode', 'license': 'https://spdx.org/licenses/GPL-3.0', 'codeRepository': 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  • result: {'type': 'float', 'value': 32.432432432432435}

10071871

Meta

  • generated_at: 2025-05-14T06:57:26.087390
  • workflow: {'name': 'CodeMetaEvaluator', 'url': '', 'version': 'v0.0.1'}

Data

  • indicator: {'id': 'F1', 'name': 'CodemetaCompleteness', 'identifier': ''}
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11212338

Meta

  • generated_at: 2025-05-14T06:57:26.096928
  • workflow: {'name': 'CodeMetaEvaluator', 'url': '', 'version': 'v0.0.1'}

Data

  • indicator: {'id': 'F1', 'name': 'CodemetaCompleteness', 'identifier': ''}
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15204558

Meta

  • generated_at: 2025-05-14T06:57:26.106313
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Data

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Data

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  • artifacts: {'url': '', 'softwareVersion': '', 'report': 'Completeness of the CodeMeta file based on the CodeMeta codemeta-3.0 specification.\n\nThe following keys are missing: targetProduct, applicationSubCategory, fileSize, installUrl, memoryRequirements, permissions, processorRequirements, releaseNotes, softwareHelp, softwareVersion, storageRequirements, supportingData, citation, copyrightHolder, copyrightYear, editor, encoding, fileFormat, funder, producer, provider, publisher, sponsor, isAccessibleForFree, isPartOf, hasPart, position, identifier, sameAs, url, relatedLink, givenName, familyName, email, affiliation, identifier, address, , , softwareSuggestions, maintainer, continuousIntegration, buildInstructions, embargoEndDate, funding, readme, creator, review, reviewAspect, reviewBody, endDate, roleName, startDate', 'codemeta': {'@context': 'https://doi.org/10.5063/schema/codemeta-2.0', '@type': 'SoftwareSourceCode', 'license': 'https://spdx.org/licenses/GPL-3.0', 'codeRepository': 'git+https://github.com/R3BRootGroup/R3BRoot.git', 'contIntegration': 'https://github.com/R3BRootGroup/R3BRoot/actions', 'dateCreated': '2009-04-14', 'datePublished': '2009-08-01', 'dateModified': '2021-05-12', 'downloadUrl': 'https://github.com/R3BRootGroup/R3BRoot/archive/refs/tags/may21.tar.gz', 'issueTracker': 'https://github.com/R3BRootGroup/R3BRoot/issues', 'name': 'R3BRoot', 'version': 'oct21', 'description': 'Software for simulations and data analysis of Reactions with Relativistic Radioactive Beams experiment at FAIR', 'applicationCategory': 'Nuclear physics', 'developmentStatus': 'active', 'referencePublication': 'https://doi.org/10.1088/1742-6596/523/1/012034', 'keywords': ['MC simulation', 'structure of nuclei', 'nuclear reactions', 'excitation energy'], 'programmingLanguage': ['C', 'C++'], 'runtimePlatform': ['ROOT'], 'operatingSystem': ['Linux', 'macOS'], 'softwareRequirements': ['FairRoot, FairSoft'], 'author': [{'@type': 'Person', 'givenName': 'Hector', 'familyName': 'Alvarez Pol'}, {'@type': 'Person', 'givenName': 'Michael', 'familyName': 'Heil'}, {'@type': 'Person', 'givenName': 'Dmytro', 'familyName': 'Kresan'}, {'@type': 'Person', 'givenName': 'Jan', 'familyName': 'Mayer'}, {'@type': 'Person', 'givenName': 'Jose Luis', 'familyName': 'Rodriguez'}, {'@type': 'Person', 'givenName': 'Vadim', 'familyName': 'Wagner'}], 'contributor': [{'@type': 'Person', 'givenName': 'Pablo', 'familyName': 'Cabanelas'}, {'@type': 'Person', 'givenName': 'Audrey', 'familyName': 'Chatillon'}, {'@type': 'Person', 'givenName': 'Christiaan', 'familyName': 'Douma'}, {'@type': 'Person', 'givenName': 'Ashton', 'familyName': 'Falduto'}, {'@type': 'Person', 'givenName': 'Eli', 'familyName': 'Galiana'}, {'@type': 'Person', 'givenName': 'Gabriel', 'familyName': 'Garcia'}, {'@type': 'Person', 'givenName': 'Igor', 'familyName': 'Gasparic'}, {'@type': 'Person', 'givenName': 'Antia', 'familyName': 'Graña'}, {'@type': 'Person', 'givenName': 'Benjamin', 'familyName': 'Heiss'}, {'@type': 'Person', 'givenName': 'Alexander', 'familyName': 'Inglessi'}, {'@type': 'Person', 'givenName': 'Aleksandra', 'familyName': 'Kelic-Heil'}, {'@type': 'Person', 'givenName': 'Philipp', 'familyName': 'Klenze'}, {'@type': 'Person', 'givenName': 'Aron', 'familyName': 'Kripko'}, {'@type': 'Person', 'givenName': 'Marc', 'familyName': 'Labiche'}, {'@type': 'Person', 'givenName': 'Bastian', 'familyName': 'Loeher'}, {'@type': 'Person', 'givenName': 'Ralf', 'familyName': 'Plag'}, {'@type': 'Person', 'givenName': 'Lukas', 'familyName': 'Ponnath'}, {'@type': 'Person', 'givenName': 'Alexey', 'familyName': 'Rybalchenko'}, {'@type': 'Person', 'givenName': 'Sonja', 'familyName': 'Storck'}, {'@type': 'Person', 'givenName': 'Ina', 'familyName': 'Syndikus'}, {'@type': 'Person', 'givenName': 'Ryo', 'familyName': 'Taniuchi'}, {'@type': 'Person', 'givenName': 'Joachim', 'familyName': 'Tscheuschner'}, {'@type': 'Person', 'givenName': 'Alicia', 'familyName': 'Wongel'}, {'@type': 'Person', 'givenName': 'Lorenzo', 'familyName': 'Zanetti'}]}}
  • result: {'type': 'float', 'value': 28.37837837837838}

7018379

Meta

  • generated_at: 2025-05-14T06:57:26.143365
  • workflow: {'name': 'CodeMetaEvaluator', 'url': '', 'version': 'v0.0.1'}

Data

  • indicator: {'id': 'F1', 'name': 'CodemetaCompleteness', 'identifier': ''}
  • artifacts: {'url': '', 'softwareVersion': 'sep22', 'report': 'Completeness of the CodeMeta file based on the CodeMeta codemeta-3.0 specification.\n\nThe following keys are missing: targetProduct, applicationSubCategory, fileSize, installUrl, memoryRequirements, permissions, processorRequirements, softwareHelp, storageRequirements, supportingData, citation, copyrightHolder, copyrightYear, editor, encoding, fileFormat, funder, producer, provider, publisher, sponsor, version, isAccessibleForFree, isPartOf, hasPart, position, identifier, sameAs, url, relatedLink, givenName, familyName, email, affiliation, identifier, address, , , softwareSuggestions, continuousIntegration, buildInstructions, embargoEndDate, funding, creator, review, reviewAspect, reviewBody, endDate, roleName, startDate', 'codemeta': {'@context': 'https://doi.org/10.5063/schema/codemeta-2.0', '@type': 'SoftwareSourceCode', 'license': 'https://spdx.org/licenses/GPL-3.0', 'codeRepository': 'git+https://github.com/R3BRootGroup/R3BRoot.git', 'contIntegration': 'https://github.com/R3BRootGroup/R3BRoot/actions', 'dateCreated': '2009-04-14', 'datePublished': '2009-08-01', 'dateModified': '2021-05-12', 'downloadUrl': 'https://github.com/R3BRootGroup/R3BRoot/archive/refs/tags/may21.tar.gz', 'issueTracker': 'https://github.com/R3BRootGroup/R3BRoot/issues', 'name': 'R3BRoot', 'softwareVersion': 'sep22', 'description': 'Software for simulations and data analysis of Reactions with Relativistic Radioactive Beams experiment at FAIR', 'readme': 'https://github.com/R3BRootGroup/R3BRoot/blob/master/README.md', 'releaseNotes': '', 'applicationCategory': 'Nuclear physics', 'developmentStatus': 'active', 'referencePublication': 'https://doi.org/10.1088/1742-6596/523/1/012034', 'keywords': ['MC simulation', 'structure of nuclei', 'nuclear reactions', 'excitation energy'], 'programmingLanguage': ['C', 'C++'], 'runtimePlatform': ['ROOT'], 'operatingSystem': ['Linux', 'macOS'], 'softwareRequirements': ['FairRoot, FairSoft'], 'maintainer': {'@type': 'Person', 'givenName': 'Jose Luis', 'familyName': 'Rodriguez Sanchez'}, 'author': [{'@type': 'Person', 'givenName': 'Hector', 'familyName': 'Alvarez Pol'}, {'@type': 'Person', 'givenName': 'Michael', 'familyName': 'Heil'}, {'@type': 'Person', 'givenName': 'Dmytro', 'familyName': 'Kresan'}, {'@type': 'Person', 'givenName': 'Jan', 'familyName': 'Mayer'}, {'@type': 'Person', 'givenName': 'Jose Luis', 'familyName': 'Rodriguez'}, {'@type': 'Person', 'givenName': 'Vadim', 'familyName': 'Wagner'}], 'contributor': [{'@type': 'Person', 'givenName': 'Pablo', 'familyName': 'Cabanelas'}, {'@type': 'Person', 'givenName': 'Audrey', 'familyName': 'Chatillon'}, {'@type': 'Person', 'givenName': 'Christiaan', 'familyName': 'Douma'}, {'@type': 'Person', 'givenName': 'Ashton', 'familyName': 'Falduto'}, {'@type': 'Person', 'givenName': 'Eli', 'familyName': 'Galiana'}, {'@type': 'Person', 'givenName': 'Gabriel', 'familyName': 'Garcia'}, {'@type': 'Person', 'givenName': 'Igor', 'familyName': 'Gasparic'}, {'@type': 'Person', 'givenName': 'Antia', 'familyName': 'Graña'}, {'@type': 'Person', 'givenName': 'Benjamin', 'familyName': 'Heiss'}, {'@type': 'Person', 'givenName': 'Alexander', 'familyName': 'Inglessi'}, {'@type': 'Person', 'givenName': 'Aleksandra', 'familyName': 'Kelic-Heil'}, {'@type': 'Person', 'givenName': 'Philipp', 'familyName': 'Klenze'}, {'@type': 'Person', 'givenName': 'Aron', 'familyName': 'Kripko'}, {'@type': 'Person', 'givenName': 'Marc', 'familyName': 'Labiche'}, {'@type': 'Person', 'givenName': 'Bastian', 'familyName': 'Loeher'}, {'@type': 'Person', 'givenName': 'Ralf', 'familyName': 'Plag'}, {'@type': 'Person', 'givenName': 'Lukas', 'familyName': 'Ponnath'}, {'@type': 'Person', 'givenName': 'Alexey', 'familyName': 'Rybalchenko'}, {'@type': 'Person', 'givenName': 'Sonja', 'familyName': 'Storck'}, {'@type': 'Person', 'givenName': 'Ina', 'familyName': 'Syndikus'}, {'@type': 'Person', 'givenName': 'Ryo', 'familyName': 'Taniuchi'}, {'@type': 'Person', 'givenName': 'Joachim', 'familyName': 'Tscheuschner'}, {'@type': 'Person', 'givenName': 'Alicia', 'familyName': 'Wongel'}, {'@type': 'Person', 'givenName': 'Lorenzo', 'familyName': 'Zanetti'}, {'@type': 'Person', 'givenName': 'Martina', 'familyName': 'Feijoo'}, {'@type': 'Person', 'givenName': 'Valerii', 'familyName': 'Panin'}]}}
  • result: {'type': 'float', 'value': 32.432432432432435}

Logs

Processing record: Record #15204558 : R3BRoot Software
Reloading codemeta from Zenodo
Getting all versions of the record from Zenodo
Versions: {12193515: 'jun24', 10071871: 'nov23', 11212338: 'may24', 15204558: 'apr25', 14584994: 'jan25', 14289530: 'dec24', 5549470: 'oct21', 7018379: 'sep22'}
retrieved codemeta for version 12193515, created: 2024-06-20 21:36:25.769314+00:00, modified: 2024-06-20 21:36:26.083529+00:00
retrieved codemeta for version 10071871, created: 2023-11-04 18:01:45.348616+00:00, modified: 2023-11-04 18:01:45.501823+00:00
retrieved codemeta for version 11212338, created: 2024-05-17 22:12:02.416333+00:00, modified: 2024-05-17 22:12:02.571797+00:00
retrieved codemeta for version 15204558, created: 2025-04-12 21:19:39.934685+00:00, modified: 2025-04-12 21:19:40.127512+00:00
retrieved codemeta for version 14584994, created: 2025-01-01 14:21:26.251660+00:00, modified: 2025-01-01 14:21:26.444435+00:00
retrieved codemeta for version 14289530, created: 2024-12-06 14:40:50.379166+00:00, modified: 2024-12-06 14:40:50.491852+00:00
retrieved codemeta for version 5549470, created: 2021-10-05 08:13:21.991033+00:00, modified: 2022-09-17 09:50:04.765144+00:00
retrieved codemeta for version 7018379, created: 2022-08-24 08:34:27.526727+00:00, modified: 2022-09-17 09:50:04.874095+00:00
Compute completeness for all versions
Completeness for 12193515 = 32.43%
Completeness for 10071871 = 32.43%
Completeness for 11212338 = 32.43%
Completeness for 15204558 = 44.59%
Completeness for 14584994 = 44.59%
Completeness for 14289530 = 32.43%
Completeness for 5549470 = 28.38%
Completeness for 7018379 = 32.43%
Repo: https://github.com/R3BRootGroup/R3BRoot
Reloading SOMEF codemeta from repository
SOftware Metadata Extraction Framework (SOMEF) Command Line Interface

/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/textblob/_text.py:218: SyntaxWarning: invalid escape sequence '\.'
  RE_ABBR1 = re.compile("^[A-Za-z]\.$")       # single letter, "T. De Smedt"
/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/textblob/_text.py:219: SyntaxWarning: invalid escape sequence '\.'
  RE_ABBR2 = re.compile("^([A-Za-z]\.)+$")    # alternating letters, "U.S."
/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/somef/regular_expressions.py:75: SyntaxWarning: invalid escape sequence '\['
  title = re.split('\[\!', title)[0].strip()
/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/somef/regular_expressions.py:114: SyntaxWarning: invalid escape sequence '\.'
  name_in_link = re.findall('https://([^.]+)\.readthedocs\.io', link)
Traceback (most recent call last):
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/nltk/corpus/util.py", line 84, in __load
    root = nltk.data.find(f"{self.subdir}/{zip_name}")
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/nltk/data.py", line 579, in find
    raise LookupError(resource_not_found)
LookupError: 
**********************************************************************
  Resource wordnet not found.
  Please use the NLTK Downloader to obtain the resource:

  >>> import nltk
  >>> nltk.download('wordnet')
  
  For more information see: https://www.nltk.org/data.html

  Attempted to load corpora/wordnet.zip/wordnet/

  Searched in:
    - '/root/nltk_data'
    - '/builds/escape-ossr/rs_quality_checks/.venv/nltk_data'
    - '/builds/escape-ossr/rs_quality_checks/.venv/share/nltk_data'
    - '/builds/escape-ossr/rs_quality_checks/.venv/lib/nltk_data'
    - '/usr/share/nltk_data'
    - '/usr/local/share/nltk_data'
    - '/usr/lib/nltk_data'
    - '/usr/local/lib/nltk_data'
**********************************************************************


During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/builds/escape-ossr/rs_quality_checks/.venv/bin/somef", line 10, in <module>
    sys.exit(cli())
             ^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/click/core.py", line 1161, in __call__
    return self.main(*args, **kwargs)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/click/core.py", line 1082, in main
    rv = self.invoke(ctx)
         ^^^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/click/core.py", line 1697, in invoke
    return _process_result(sub_ctx.command.invoke(sub_ctx))
                           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/click/core.py", line 1443, in invoke
    return ctx.invoke(self.callback, **ctx.params)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/click/core.py", line 788, in invoke
    return __callback(*args, **kwargs)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/somef/__main__.py", line 162, in describe
    from . import somef_cli
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/somef/somef_cli.py", line 11, in <module>
    from . import header_analysis, regular_expressions, process_repository, configuration, process_files, \
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/somef/header_analysis.py", line 19, in <module>
    citation = [Word("citation").synsets[3], Word("reference").synsets[1], Word("cite").synsets[3]]
                ^^^^^^^^^^^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/textblob/decorators.py", line 24, in __get__
    value = obj.__dict__[self.func.__name__] = self.func(obj)
                                               ^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/textblob/blob.py", line 190, in synsets
    return self.get_synsets(pos=None)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/textblob/blob.py", line 211, in get_synsets
    return _wordnet.synsets(self.string, pos)
           ^^^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/nltk/corpus/util.py", line 120, in __getattr__
    self.__load()
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/nltk/corpus/util.py", line 86, in __load
    raise e
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/nltk/corpus/util.py", line 81, in __load
    root = nltk.data.find(f"{self.subdir}/{self.__name}")
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/nltk/data.py", line 579, in find
    raise LookupError(resource_not_found)
LookupError: 
**********************************************************************
  Resource wordnet not found.
  Please use the NLTK Downloader to obtain the resource:

  >>> import nltk
  >>> nltk.download('wordnet')
  
  For more information see: https://www.nltk.org/data.html

  Attempted to load corpora/wordnet

  Searched in:
    - '/root/nltk_data'
    - '/builds/escape-ossr/rs_quality_checks/.venv/nltk_data'
    - '/builds/escape-ossr/rs_quality_checks/.venv/share/nltk_data'
    - '/builds/escape-ossr/rs_quality_checks/.venv/lib/nltk_data'
    - '/usr/share/nltk_data'
    - '/usr/local/share/nltk_data'
    - '/usr/lib/nltk_data'
    - '/usr/local/lib/nltk_data'
**********************************************************************


Creating empty docs/records/15204558/somef_codemeta_15204558.json