Comparison Report

Comparison between `codemeta_5592836.json` and `somef_codemeta_5592836.json`:

Summary

Comparison for Zenodo record 5592836, Dark matter constraints from dwarf galaxies: a data-driven LAT analysis, hosted on RepoType.GITLAB_SELF_HOSTED:

contains 0 differences
contains 0 same values
missing 3 keys in docs/records/5592836/codemeta_5592836.json:
softwareVersion
- issueTracker
- readme
missing 10 keys in docs/records/5592836/somef_codemeta_5592836.json:
- name
- codeRepository
- license
- version
- softwareVersion
- datePublished
- programmingLanguage
- issueTracker
- readme
- dateCreated

Full Report

Same Values

No items have the same values.

Differences

No differences found.

Missing Keys in First File:

softwareVersion
issueTracker
readme

Missing Keys in Second File:

name
codeRepository
license
version
softwareVersion
datePublished
programmingLanguage
issueTracker
readme
dateCreated

Completeness Report

5592836

Data

indicator: {'id': 'F1', 'name': 'CodemetaCompleteness', 'identifier': ''}
artifacts: {'url': '', 'softwareVersion': '', 'report': 'Completeness of the CodeMeta file based on the CodeMeta codemeta-3.0 specification.\n\nThe following keys are missing: targetProduct, applicationCategory, applicationSubCategory, fileSize, installUrl, memoryRequirements, operatingSystem, permissions, processorRequirements, releaseNotes, softwareHelp, softwareVersion, storageRequirements, supportingData, citation, copyrightHolder, copyrightYear, dateModified, editor, encoding, fileFormat, funder, producer, provider, publisher, sponsor, isAccessibleForFree, hasPart, position, identifier, sameAs, url, relatedLink, givenName, familyName, email, affiliation, identifier, address, , , softwareSuggestions, maintainer, continuousIntegration, buildInstructions, embargoEndDate, funding, issueTracker, referencePublication, readme, creator, review, reviewAspect, reviewBody, endDate, roleName, startDate', 'codemeta': {'@context': 'https://doi.org/10.5063/schema/codemeta-2.0', '@type': 'SoftwareSourceCode', 'license': 'https://spdx.org/licenses/MIT', 'codeRepository': 'https://gitlab.in2p3.fr/christopher.eckner/mlfermilatdwarfs/', 'dateCreated': '2021-10-06', 'datePublished': '2021-10-22', 'version': 'v1.0', 'developmentStatus': 'active', 'downloadUrl': 'https://gitlab.in2p3.fr/christopher.eckner/mlfermilatdwarfs/-/archive/master/mlfermidwarfs-master.tar.gz', 'name': 'Dark matter constraints from dwarf galaxies: a data-driven LAT analysis', 'description': 'Python code to derive data-driven upper limits on the thermally averaged, velocity-weighted pair-annihilation cross-section (velocity-independent) of a user-defined particle dark matter model using the expected differential gamma-ray spectrum of pair-annihilation events (provided by the user) as well as 10 years of Fermi-LAT data from observations of the Milky Way´s dwarf spheroidal galaxies.', 'isPartOf': 'https://gitlab.in2p3.fr/escape2020,https://projectescape.eu/', 'keywords': ['ESCAPE', 'jupyter-notebook'], 'programmingLanguage': ['Python'], 'runtimePlatform': ['Python >3.6'], 'softwareRequirements': ['numpy>=1.19', 'scipy>=1.6.2', 'iminuit<=1.5.4', 'astropy>=4.1', 'scikit-learn>=0.24'], 'author': [{'@type': 'Person', 'givenName': 'Francesca', 'familyName': 'Calore', 'email': 'calore@lapth.cnrs.fr', 'affiliation': {'@type': 'Organization', 'name': 'LAPTh, CNRS'}}, {'@type': 'Person', 'givenName': 'Bryan', 'familyName': 'Zaldívar', 'email': 'b.zaldivar.m@csic.es', 'affiliation': {'@type': 'Organization', 'name': 'IFT-UAM/CSIC'}}, {'@type': 'Person', 'givenName': 'Pasquale', 'familyName': 'Serpico', 'email': 'serpico@lapth.cnrs.fr', 'affiliation': {'@type': 'Organization', 'name': 'LAPTh, CNRS'}}], 'contributor': [{'@type': 'Person', 'givenName': 'Christopher', 'familyName': 'Eckner', 'email': 'eckner@lapth.cnrs.fr', 'affiliation': {'@type': 'Organization', 'name': 'LAPTh, CNRS'}}]}}
result: {'type': 'float', 'value': 22.972972972972975}

Logs

Processing record: Record #5592836 : Dark matter constraints from dwarf galaxies: a data-driven LAT analysis
Reloading codemeta from Zenodo
Getting all versions of the record from Zenodo
Versions: {5592836: 'v1.0'}
retrieved codemeta for version 5592836, created: 2021-10-22 14:35:26.048736+00:00, modified: 2022-01-25 17:50:02.948820+00:00
Compute completeness for all versions
Completeness for 5592836 = 22.97%
Repo: https://gitlab.in2p3.fr/christopher.eckner/mlfermilatdwarfs/
Reloading SOMEF codemeta from repository
SOftware Metadata Extraction Framework (SOMEF) Command Line Interface

Traceback (most recent call last):
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/nltk/corpus/util.py", line 84, in __load
    root = nltk.data.find(f"{self.subdir}/{zip_name}")
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/nltk/data.py", line 579, in find
    raise LookupError(resource_not_found)
LookupError: 
**********************************************************************
  Resource [93mwordnet[0m not found.
  Please use the NLTK Downloader to obtain the resource:

  [31m>>> import nltk
  >>> nltk.download('wordnet')
  [0m
  For more information see: https://www.nltk.org/data.html

  Attempted to load [93mcorpora/wordnet.zip/wordnet/[0m

  Searched in:
    - '/root/nltk_data'
    - '/builds/escape-ossr/rs_quality_checks/.venv/nltk_data'
    - '/builds/escape-ossr/rs_quality_checks/.venv/share/nltk_data'
    - '/builds/escape-ossr/rs_quality_checks/.venv/lib/nltk_data'
    - '/usr/share/nltk_data'
    - '/usr/local/share/nltk_data'
    - '/usr/lib/nltk_data'
    - '/usr/local/lib/nltk_data'
**********************************************************************


During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/builds/escape-ossr/rs_quality_checks/.venv/bin/somef", line 10, in <module>
    sys.exit(cli())
             ^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/click/core.py", line 1161, in __call__
    return self.main(*args, **kwargs)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/click/core.py", line 1082, in main
    rv = self.invoke(ctx)
         ^^^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/click/core.py", line 1697, in invoke
    return _process_result(sub_ctx.command.invoke(sub_ctx))
                           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/click/core.py", line 1443, in invoke
    return ctx.invoke(self.callback, **ctx.params)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/click/core.py", line 788, in invoke
    return __callback(*args, **kwargs)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/somef/__main__.py", line 162, in describe
    from . import somef_cli
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/somef/somef_cli.py", line 11, in <module>
    from . import header_analysis, regular_expressions, process_repository, configuration, process_files, \
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/somef/header_analysis.py", line 19, in <module>
    citation = [Word("citation").synsets[3], Word("reference").synsets[1], Word("cite").synsets[3]]
                ^^^^^^^^^^^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/textblob/decorators.py", line 24, in __get__
    value = obj.__dict__[self.func.__name__] = self.func(obj)
                                               ^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/textblob/blob.py", line 190, in synsets
    return self.get_synsets(pos=None)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/textblob/blob.py", line 211, in get_synsets
    return _wordnet.synsets(self.string, pos)
           ^^^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/nltk/corpus/util.py", line 120, in __getattr__
    self.__load()
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/nltk/corpus/util.py", line 86, in __load
    raise e
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/nltk/corpus/util.py", line 81, in __load
    root = nltk.data.find(f"{self.subdir}/{self.__name}")
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/builds/escape-ossr/rs_quality_checks/.venv/lib/python3.12/site-packages/nltk/data.py", line 579, in find
    raise LookupError(resource_not_found)
LookupError: 
**********************************************************************
  Resource [93mwordnet[0m not found.
  Please use the NLTK Downloader to obtain the resource:

  [31m>>> import nltk
  >>> nltk.download('wordnet')
  [0m
  For more information see: https://www.nltk.org/data.html

  Attempted to load [93mcorpora/wordnet[0m

  Searched in:
    - '/root/nltk_data'
    - '/builds/escape-ossr/rs_quality_checks/.venv/nltk_data'
    - '/builds/escape-ossr/rs_quality_checks/.venv/share/nltk_data'
    - '/builds/escape-ossr/rs_quality_checks/.venv/lib/nltk_data'
    - '/usr/share/nltk_data'
    - '/usr/local/share/nltk_data'
    - '/usr/lib/nltk_data'
    - '/usr/local/lib/nltk_data'
**********************************************************************


Creating empty docs/records/5592836/somef_codemeta_5592836.json

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